Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797403.1_cds_XP_016455023.1_4856
CDS Infomation

[gene=LOC107779168] [db_xref=GeneID:107779168] [protein=vicilin-like seed storage protein At2g28490] [protein_id=XP_016455023.1] [location=complement(join(6451..6963,7760..8194,8542..8622,8753..8934,9534..9858))] [gbkey=CDS]
Sequence

ATGGGAAACAGAAAGGCTCTTTTGCTCATATTGCTGGTGTTTTCCTCTGTTCTTGTGGCT
TCTGTTGGTGCTTATGAATATGAAAGAAGAGGGAAAGAGGTGGAAGAGGAAGAGGAAAGT
ACTGAAAGCGAATGGTTTTTATTGCATGATTCAAAGGAAATAGTGAGGACTGATGCTGGA
ATTATGAGAGTAGTGAGAGGTGGATTTGGTGGTGGGGTTTCTATGTTTCAAAGTCCAATG
CATATTGGTTTAATTACTATGGAACCTAACAGTCTTTTCATCCCTCAGTATCTTGATTCT
CATCTTACCCTCTTTGTTCGCAGAGGGGAAACAAGAATTGGGCACATATACAAAGATGAC
TTTGTAGAAAGGCGATTGAAGGAAGGAGATGTGTACAGTATTCGAGCTGGCTCTGCTTTC
TATCTTGTTAATCCAGCTGAGGGACAGAGACTTCACATCATTTGCAGCATTAGCACCTCT
AGCAGCTTAGGATGGCACGGTTTCCAGTCTTTCTTCATTGGTGGTGGAATGTATCCAACA
TCTGTACTTGCTGGATTCGACTCTTTGACATTATCGACAGCATTCAATGTGTCCACAGAC
GAAGTGAGTGAGATCTTGACAAGACAATATTCAGGTGCAATTGTATATCTGAACACTACT
CATTCTCCTACACCCAGCATATGGGCTACATTCTTGAACCTAGAACAGCATCAGAAACTT
GATCACCTAAAGCGAATTGTGCATTTGGAGGAAGAAGCTAGCCAAGAAGAAGACGAGGAA
AAAGAGCAGCCAATATGGTCTTTGAGAAAGTTCTTGACTAATCTTATTGGTAACGAAAGA
AACAGGAGAGAGGGGAAGAAAGTCGACGACAGACGAAGAGGCAAAGGTCCAGATTCCTAC
AATCTCTTTGACAGAAAGGCAGATTATAAGAATGACTATGGATGGAGCTTGGCCTTGGAT
CAATCTGATTATTCTCCATTGAAGCACGCTGACATTGGCGTCTATCTTGTCAATCTTTCA
GCGGGAGCTATGATGGCACCTCATATCAATCCAACAGCAACAGAATATGGAATCGTGTTA
AGAGGAAGTGGCAGTATCCAAATTGTGTATCCAAACGGTACATTAGCAATGAACTCTAGA
GTAAACGAAGGAGATGTATTTTGGGTGCCAAGGTACTTCCCATTCTGCCAAATCGCATCA
AGAGCGGGTCCGTTCGAGTTCTTCGGCTTCACAACAACAGCTAAAAAGAATAGGCCACAG
TTCTTGGTAGGTCAGAATTCAATACTACAAAGCATGAGGGGACCTGAATTTGCAGCTGCA
TTTGGTGTTAGTGAAGAGAGACTTGGGAGAATATTGGATGCTCAGCGTGAAGCTGTGATA
TTGCCGTCAGCGTCTGTTGCTCCGACGGAGCCGATTGATCCGAGAAAGGAGGAGGAAGAA
AAACGAGAGAGGGGAAGGGAGAAAGAGATTGTAATGAAAATACCAGAAGTGAATATTAGG
AGCTTTGGCAATGACATGATAATGGGATTTGCTTAG

Peptide Sequence

PEP ID

XP_016455023.1
PEP Infomation

PREDICTED: vicilin-like seed storage protein At2g28490 [Nicotiana tabacum]
Sequence

MGNRKALLLILLVFSSVLVASVGAYEYERRGKEVEEEEESTESEWFLLHDSKEIVRTDAG
IMRVVRGGFGGGVSMFQSPMHIGLITMEPNSLFIPQYLDSHLTLFVRRGETRIGHIYKDD
FVERRLKEGDVYSIRAGSAFYLVNPAEGQRLHIICSISTSSSLGWHGFQSFFIGGGMYPT
SVLAGFDSLTLSTAFNVSTDEVSEILTRQYSGAIVYLNTTHSPTPSIWATFLNLEQHQKL
DHLKRIVHLEEEASQEEDEEKEQPIWSLRKFLTNLIGNERNRREGKKVDDRRRGKGPDSY
NLFDRKADYKNDYGWSLALDQSDYSPLKHADIGVYLVNLSAGAMMAPHINPTATEYGIVL
RGSGSIQIVYPNGTLAMNSRVNEGDVFWVPRYFPFCQIASRAGPFEFFGFTTTAKKNRPQ
FLVGQNSILQSMRGPEFAAAFGVSEERLGRILDAQREAVILPSASVAPTEPIDPRKEEEE
KRERGREKEIVMKIPEVNIRSFGNDMIMGFA

Transcript Sequence

Gene sequence data has not been registered.